elastic / elastic/apm-agent-python

capture_exception raise TransportException and abort transaction

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Descrizione

**Describe the bug**: ...

During an exception handling capture_exeption fail to send data and as result transaction is aborted.
Seems the problem is decoding the data payload (memoryview type) to urllib3

This snippet replicate the issue in my env, just need to setup elasticapm client:

from shapely.geometry import Polygon
import geopandas as gpd
import elasticapm
import traceback

client = elasticapm.Client()
client.begin_transaction(transaction_type="script")
result = 'unknown'
try:
with elasticapm.capture_span(name="a_name", labels={}):
a = Polygon()
b = gpd.GeoDataFrame(geometry=[a])
b.centroid.x[0]
result = 'success'
except Exception:
message = traceback.format_exc()
client.capture_exception()
result = 'failed'
finally:
client.end_transaction(name="transaction_name", result=result)

result in the following trace:

```
2021-12-22 12:22:56,737 [urllib3.connectionpool] [DEBUG] https://:443 "POST /intake/v2/events HTTP/1.1" 400 None
2021-12-22 12:22:56,828 [elasticapm.transport] [ERROR] Failed to submit message: 'HTTP 400: {"accepted":24,"errors":[{"message":"decode error: data read error: v2.errorRoot.Error: v2.errorEvent.Exception: v2.errorException.Stacktrace: []v2.stacktraceFrame: v2.stacktraceFrame.Vars: Read: unexpected value type: 0, error found in #10 byte of ...|l_value\\": NaN}, \\"pre|..., bigger context ...|,\\\\n dtype=object)\\", \\"op\\": \\"x\\", \\"null_value\\": NaN}, \\"pre_context\\": [\\" # type: (str, np.array[|...","document":"{\\"error\\": {\\"context\\": {\\"custom\\": {}}, \\"id\\": \\".....\\", \\"exception\\": {\\"message\\": \\"IndexError: list index out of range\\", \\"type\\": \\"IndexError\\", \\"module\\": \\"builtins\\", \\"stacktrace\\": [{\\"abs_path\\": \\"./stripe_delivery_pipeline.py\\", \\"filename\\": \\"stripe_delivery_pipeline.py\\", \\"module\\": \\"__main__\\", \\"function\\": \\"main\\", \\"lineno\\": 1970, \\"library_frame\\": false, \\"vars\\": {\\"elasticapm_span_labels\\": null, \\"elasticapm_span_name\\": \\"delivery-pipeline-main\\", \\"location\\": \\"undefined\\", \\"country\\": \\"undefined\\", \\"message\\": \\"Traceback (most recent call last):\\\\n File \\\\\\"./stripe_delivery_pipeline.py\\\\\\", line 1970, in main\\\\n status, message, country, location = real_main_multi_AOI(scene_set_id, scene_id_tag)\\\\n File \\\\\\"./stri...\\", \\"status\\": \\"Failed\\", \\"result\\": null, \\"labels\\": {\\"pod_name\\": null, \\"job_id\\": null, \\"sceneset_id\\": \\".........\\", \\"scene_id_tag\\": null}, \\" ...[cut]
```

and

```
Traceback (most recent call last):
File "/home/lpirelli/miniconda/envs/py36/lib/python3.6/site-packages/elasticapm/transport/base.py", line 239, in _flush
self.send(data)
File "/home/lpirelli/miniconda/envs/py36/lib/python3.6/site-packages/elasticapm/transport/http.py", line 113, in send
raise TransportException(message, data, print_trace=print_trace)
elasticapm.transport.exceptions.TransportException: HTTP 400: {"accepted":24,"errors":[{"message":"decode error: data read error: v2.errorRoot.Error: v2.errorEvent.Exception: v2.errorException.Stacktrace: []v2.stacktraceFrame: v2.stacktraceFrame.Vars: Read: unexpected value type: 0, error found in #10 byte of ...|l_value\": NaN}, \"pre|..., bigger context ...|,\\n dtype=object)\", \"op\": \"x\", \"null_value\": NaN}, \"pre_context\": [\" # type: (str, np.array[|...","document":"{\"error\": {\"context\": {\"custom\": {}}, \"id\": \"....\", \"exception\": {\"message\": \"IndexError: list index out of range\", \"type\": \"IndexError\", \"module\": \"builtins\", \"stacktra ....[cut]
```

data payload in memory view is:

```
a= b'\x1f\x8b\x08\x00a\x11\xc3a\x02\xff\xed}{w#\xb7\xb1\xe7\xff\xfb)xx\xb3\xeb\xf1\x1e\x91\xc2\xb3\x1f:q\xb2\xb2F\xb6\x95;\x0fE\x92\x938\xe39}\xd0\xddh\xa93$\x9b\xe9&53\xf1z?\xfbV\x01\xfd\xe4C\xa44\x92F\xf6pr\xaf%u\x03\xe8z\xa1\xf0.... [cut]'

str(a, 'utf8')
UnicodeDecodeError: 'utf-8' codec can't decode byte 0x8b in position 1: invalid start byte
```
**Environment (please complete the following information)**
- OS: Linux
- Python version:Python 3.6.10 |Anaconda, Inc.| (default, Mar 23 2020, 23:13:11) [GCC 7.3.0] on linux
- APM Server version: elasticsearch==7.10.1, elastic-apm==6.4.0

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