ebi-ait/submissions-workstream

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A repository dedicated to the submissions workstreams - All code, materials and services go here.

Stars: 0
Forks: 0
Open beginner issues: 0
Indexed issues: 21

Dominant language: Jupyter Notebook
License: No license data
Last GitHub push: Feb 27, 2023
Latest indexed: Sep 15, 2026
Contributing guide: No contributing guide
Code of conduct: No code of conduct
Beginner labels: No beginner labels indexed
PR merge metrics: No merged PRs in 30d

Open All

21 open issues indexed

Submissions solutions redesign Open

Epic Submissions

ebi-ait/submissions-workstream#2 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 15, 2026
Webin services to use GCP Firebase for authentication Open

ena Submissions

ebi-ait/submissions-workstream#13 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 15, 2026
ENA WEBIN: Isa-Json submission support Open

ena Submissions

ebi-ait/submissions-workstream#16 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 15, 2026
Webin submissions: add new analysis types Open

ena enhancement Submissions task

ebi-ait/submissions-workstream#17 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 15, 2026
Onboard Webin-CLI support Open

ena Submissions task

ebi-ait/submissions-workstream#18 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 15, 2026
UI improvements for sample checklists Open

ebi-ait/submissions-workstream#19 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Webin-REST: use bulk-validate to revalidate BioSamples when referenced in a Webin submission (https://www.ebi.ac.uk/panda/jira/browse/ENA-6310) Open

ena Submissions

ebi-ait/submissions-workstream#25 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 15, 2026
Additional tests: JSON schema validation move (Webin and BioSamples) Open

biosamples ena FAIRification Submissions

ebi-ait/submissions-workstream#27 · 1 comment · 0 reactions · 3 assignees · Indexed Sep 15, 2026
Docker image for ENA Spreadsheet Generator Open

ena Submissions

ebi-ait/submissions-workstream#38 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 15, 2026
Update webin-portal environment files with spreadsheet generator URL Open

dev task ena Submissions

ebi-ait/submissions-workstream#39 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 15, 2026
NCBI import pipeline consistency Open

biosamples FAIRification Submissions

ebi-ait/submissions-workstream#49 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 15, 2026
ENA-6355 Open

ena

ebi-ait/submissions-workstream#50 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 15, 2026
ENA-6354 Open

ena

ebi-ait/submissions-workstream#51 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 15, 2026
ENA template generator (https://github.com/enasequence/ena-spreadsheet-generator) traffic manager Open

dev task ena Submissions Website

ebi-ait/submissions-workstream#54 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 15, 2026
Updating ontologies in study DB Open

MorPhiC

ebi-ait/submissions-workstream#70 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Privacy notice for MorPhiC portal Open

MorPhiC

ebi-ait/submissions-workstream#124 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Adding time points and updating model systems to dynamic viz Open

MorPhiC

ebi-ait/submissions-workstream#126 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 15, 2026
JAX scRNAseq02 Open

MorPhiC

ebi-ait/submissions-workstream#128 · 1 comment · 0 reactions · 1 assignee · Indexed Sep 15, 2026
UCSF scRNAseq Open

MorPhiC

ebi-ait/submissions-workstream#135 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 15, 2026
Inspection: of ENA brokering for august-release datasets vs previously released data Open

MorPhiC

ebi-ait/submissions-workstream#140 · 0 comments · 0 reactions · 2 assignees · Indexed Sep 15, 2026
adding alias for studies Open

MorPhiC

ebi-ait/submissions-workstream#141 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026

ebi-ait/submissions-workstream

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