cytoscape / cytoscape/idmapper
sometimes bug with guessSource
- Dominant language
- Java
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Description
NPE while checking first 10 IDs to guess source.
Steps to (sometimes) reproduce:
1. open galfiltered
2. map Ensembl to Entrez
3. attempt to map from Entrez
==> NPE
Perhaps add a check for NULL here and skip?
https://github.com/cytoscape/idmapper/blob/master/src/main/java/org/cytoscape/idmapper/MappingSource.java#L151
Exception in thread "AWT-EventQueue-0" java.lang.NullPointerException
at org.cytoscape.idmapper.MappingSource.guessSource(MappingSource.java:151)
at org.cytoscape.idmapper.task.ColumnMappingTask.guessSource(ColumnMappingTask.java:134)
at org.cytoscape.idmapper.task.ColumnMappingTask.resetSpecies(ColumnMappingTask.java:111)
at org.cytoscape.idmapper.task.ColumnMappingTask.speciesSelectionChanged(ColumnMappingTask.java:83)
at org.cytoscape.idmapper.task.ColumnMappingTask.selectionChanged(ColumnMappingTask.java:343)
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