Idea: include UBERON link to `BodyPartsDetailsOntology`
Open
future
- Dominant language
- Python
- Stars
- 5
- Forks
- 6
- Avg merge
- 4h 6m
- Merged PRs (30d)
- 1
Description
Not included in https://github.com/con/nwb2bids/pull/333 since it is of substantial complexity to deserve an entire PR of its own, if a `location` field is discovered for the `BodyPartsDetails` field population, we could attempt an automated lookup to see if it has a valid corresponding ID in UBERON and if so drop the link for it in the `BodyPartsDetailsOntology` field
Contributor guide
Research direction
Review the context in PR #333 and trace how BodyPartsDetails and BodyPartsDetailsOntology are populated. Determine how a discovered location could be checked for a valid UBERON ID, then verify that the corresponding link is added only when the lookup succeeds.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- data
- Issue type
- Feature
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 45/100