code-saturne / code-saturne/code_saturne
Problems when enabling Catalyst 2
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Descrizione
Some recent modifications must have introduced a bug with the Catalyst 2 support because my cases used to work but no longer using either 9.1 or the master under Ubuntu 24.04.4 LTS.
On my .bashrc file I specify the required environment variables:
```
# Catalyst2 Settings
export CATALYST_IMPLEMENTATION_NAME="paraview"
export CATALYST_IMPLEMENTATION_PATHS="/home/panos/Development/Salome/SALOME/INSTALL/ParaView/lib/catalyst"
```
which point to the ParaView installation in Salome. I then build code_saturne with the options:
```
--with-salome=/home/panos/Development/Salome/SALOME
--with-catalyst2=/home/panos/Development/Salome/SALOME/INSTALL/catalyst
SALOMEENVCMD=/home/panos/Development/Salome/SALOME/env_build.sh
```
But when I try to run a case which uses Catalyst 2 I get the following errors:
```
failed to open library: libnetcdf.so.13: cannot open shared object file: No such file or directory
failed to open library: /home/panos/Development/Salome/SALOME/INSTALL/catalyst/lib/catalyst/libcatalyst-paraview.so: cannot open shared object file: No such file or directory
failed to open library: libnetcdf.so.13: cannot open shared object file: No such file or directory
failed to open library: /home/panos/Development/Salome/SALOME/INSTALL/catalyst/lib/catalyst/libcatalyst-paraview.so: cannot open shared object file: No such file or directory
failed to open library: libnetcdf.so.13: cannot open shared object file: No such file or directory
failed to open library: /home/panos/Development/Salome/SALOME/INSTALL/catalyst/lib/catalyst/libcatalyst-paraview.so: cannot open shared object file: No such file or directory
failed to open library: libnetcdf.so.13: cannot open shared object file: No such file or directory
failed to open library: /home/panos/Development/Salome/SALOME/INSTALL/catalyst/lib/catalyst/libcatalyst-paraview.so: cannot open shared object file: No such file or directory
failed to open library: libnetcdf.so.13: cannot open shared object file: No such file or directory
failed to open library: /home/panos/Development/Salome/SALOME/INSTALL/catalyst/lib/catalyst/libcatalyst-paraview.so: cannot open shared object file: No such file or directory
failed to open library: libnetcdf.so.13: cannot open shared object file: No such file or directory
failed to open library: /home/panos/Development/Salome/SALOME/INSTALL/catalyst/lib/catalyst/libcatalyst-paraview.so: cannot open shared object file: No such file or directory
```
From these messages it is clear that the code is trying to open the libcatalyst-paraview.so library from the Salome catalyst directory when it should have used the CATALYST_IMPLEMENTATION_PATHS directory to locate the library. As for libnetcdf.so.13, this is a library needed by Catalyst but it is installed in Salome yet the code does not know how and where to find it. The compilation and running takes place on a bash shell with the env_build.sh Salome settings loaded.
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Direzione di ricerca
Inizia riproducendo il caso Catalyst 2 con le variabili di .bashrc, le opzioni --with-catalyst2 mostrate e l'env_build.sh di Salome caricato. Traccia come vengono selezionati a runtime il percorso dell'implementazione di Catalyst e la dipendenza libnetcdf.so.13 di Salome. Il lavoro è completato quando il caso carica libcatalyst-paraview.so da CATALYST_IMPLEMENTATION_PATHS e risolve libnetcdf.so.13 senza gli errori segnalati.
Scritto dal modello di indicizzazione a partire dal testo della issue.
Valutazione
- Stack tecnologico
- bash, cpp, linux
- Ambito
- build-system, hpc
- Tipo di issue
- Bug
- Difficoltà
- 4/5
- Tempo stimato
- 3-5 giorni
- Stato di attività
- Tranquilla
- Chiarezza
- Abbastanza chiara
- Idoneità per principianti
- 48/100