brainglobe / brainglobe/brainrender-napari

Integrate napari layer group into atlas viewer plugin

Open
#3 1 comment 0 reactions 0 assignees View on GitHub
Dominant language
Python
Stars
24
Forks
22
Avg merge
15h 3m
Merged PRs (30d)
1

Description

Currently, we just add each part of the atlas we are interested in as a separate layer to napari. In the future, the napari representation of a BG Atlas should be a layer group containing all the layers of one atlas together.

Contributor guide

Open the contributing guide

Research direction

Start by tracing how the plugin currently adds each atlas part as a separate napari layer and how a BG Atlas is represented. Confirm napari's layer-group API and identify the plugin entry point involved; the work is done when one atlas appears as a layer group containing all of its layers.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
data-visualization, desktop
Issue type
Feature
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
45/100

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