brainglobe / brainglobe/brainreg

Check for corrupted files

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#60 0 comments 0 reactions 0 assignees View on GitHub

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enhancement
Dominant language
Python
Stars
150
Forks
37
Avg merge
3d 19h
Merged PRs (30d)
5

Description

  • Identify potential corrupted files before proceeding with registration (based on file size)
  • Identify corrupted files on loading (and report to user), exit gracefully
  • Option to continue anyway (e.g. if a small number are affected) - copy previous section?

cc @FedeClaudi

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

The issue names no files, tests, or entry points. Trace the registration and loading paths, then inspect how file sizes and load failures are currently handled. Done means detecting likely corruption before registration, reporting affected files during loading, exiting gracefully, and providing an option to continue.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
computer-vision
Issue type
Feature
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
28/100

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