biosustain / biosustain/multitfa
Import of tmodel fails
Open
- Dominant language
- Python
- Stars
- 9
- Forks
- 3
- PR merge metrics
- No merged PRs in 30d
Description
Importing tmodel fails at from .thermo_constants import * at line 20: params = CCModelParameters.from_quilt() with the error message that CCModelParameters has no attribute 'from_quilt'. It appears that an update on the Equilibrator side may have changed/removed some features.
Contributor guide
Research direction
Start at the import in thermo_constants.py, line 20, and reproduce the failure involving CCModelParameters.from_quilt(). Then inspect the Equilibrator dependency and its current API to determine what changed. Done means importing tmodel succeeds without the reported attribute error.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- bioinformatics
- Issue type
- Bug
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100