bigbio/sdrf-pipelines
View on GitHubSDRF official validator and converts SDRF to pipeline configuration files
- Stars
- 37
- Forks
- 32
- Open beginner issues
- 0
- Indexed issues
- 15
- Avg merge
- 2d 54m
- Merged PRs (30d)
- 5
- Dominant language
- Python
- License
- Apache-2.0
- Last GitHub push
- Aug 27, 2026
- Latest indexed
- Sep 14, 2026
- Contributing guide
- Contributing guide
- Code of conduct
- No code of conduct
- Beginner labels
- No beginner labels indexed
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bigbio/sdrf-pipelines#184 · 1 comment · 0 reactions · 2 assignees ·
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Versioning scheme Open
bigbio/sdrf-pipelines#213 · 0 comments · 0 reactions · 0 assignees ·
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bigbio/sdrf-pipelines#214 · 0 comments · 0 reactions · 0 assignees ·
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enhancement
bigbio/sdrf-pipelines#232 · 0 comments · 0 reactions · 0 assignees ·
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bigbio/sdrf-pipelines#238 · 1 comment · 0 reactions · 0 assignees ·
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bigbio/sdrf-pipelines#239 · 1 comment · 0 reactions · 0 assignees ·
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bigbio/sdrf-pipelines#245 · 0 comments · 0 reactions · 1 assignee ·
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low-priority
bigbio/sdrf-pipelines#258 · 0 comments · 0 reactions · 0 assignees ·
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enhancement
bigbio/sdrf-pipelines#271 · 0 comments · 0 reactions · 1 assignee ·
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bigbio/sdrf-pipelines#283 · 0 comments · 0 reactions · 0 assignees ·
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bigbio/sdrf-pipelines#333 · 0 comments · 1 reaction · 2 assignees ·
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Bundled ontology cache is stale: PRIDE:0001013 (study sample) missing, fails --use_ols_cache_only Open
bigbio/sdrf-pipelines#341 · 0 comments · 0 reactions · 0 assignees ·
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bigbio/sdrf-pipelines#344 · 1 comment · 0 reactions · 0 assignees ·
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bigbio/sdrf-pipelines#345 · 0 comments · 0 reactions · 0 assignees ·
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bigbio/sdrf-pipelines#346 · 0 comments · 0 reactions · 0 assignees ·