bedapub / bedapub/ribiosGSEA

biosCamera to run directly on a test statistic.

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Dominant language
R
Stars
2
Forks
2
PR merge metrics
No merged PRs in 30d

Description

In limma there is the cameraPR function to run it directly on a previously calculated test statistic. It would be great to have this possibility here as well and then get the same nice output table.

Contributor guide

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Research direction

Start by locating the existing biosCamera entry point and reviewing limma's cameraPR behavior for previously calculated test statistics. Compare the current output path with the requested cameraPR-style input and table. Done means biosCamera accepts a precomputed test statistic and produces the same kind of output table.

Written by the indexing model from the issue text.

Assessment

Tech stack
r
Domain
bioinformatics
Issue type
Feature
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
35/100

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