bedapub / bedapub/besca

Display bug in bc.pl.gene_expr_split_stacked

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bug
Dominant language
Python
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50
Forks
17
Avg merge
1d 4h
Merged PRs (30d)
3

Description

Split is not so clear. Colors are grey ?

```

adata = bc.datasets.Haber2017_processed()

bc.pl.gene_expr_split_stacked(adata=adata, genes=['Defa24', 'Gm15284'], split_variable='donor', subset_variable = 'region')

```

![image](https://user-images.githubusercontent.com/39824913/89298384-8b941480-d665-11ea-9f24-a3794102d1ef.png)

Contributor guide

No contributing guide indexed for this repository

Research direction

Start by locating the implementation of bc.pl.gene_expr_split_stacked and reproduce the supplied Haber2017_processed example with genes Defa24 and Gm15284, split by donor and subset by region. Compare the rendered output with the attached screenshot and establish the intended color and split presentation before defining the fix and its validation.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
data-visualization
Issue type
Bug
Difficulty
3/5
Estimated time
1-2 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
35/100

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