bedapub / bedapub/besca

Missing reformat Binary File

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Dominant language
Python
Stars
50
Forks
17
Avg merge
1d 4h
Merged PRs (30d)
3

Description

Hello,

I am encountering an issue with the installation and usage of BESCA (version 2.5.5). According to the documentation, BESCA should include a binary file called reformat, but I am unable to find this file in my installation directory.

Steps to Reproduce:

1. Installed BESCA version 2.5.5 using the command pip install git+https://github.com/bedapub/besca.git.

2. Ran pip show besca to locate the installation path.

3. Searched for the reformat file in the path /data/guoyufei/.conda/envs/scanpy/lib/python3.10/site-packages/besca/export/.

4. Used the find command to search for the file but could not locate it.

Expected Behavior:
I would expect to find and set the reformat file as executable so I can continue with the workflow that depends on it.

Contributor guide

No contributing guide indexed for this repository

Research direction

Start by inspecting the installed package at /data/guoyufei/.conda/envs/scanpy/lib/python3.10/site-packages/besca/export/ and compare its contents with the documentation’s reference to the reformat binary. Reproduce the installation with pip install git+https://github.com/bedapub/besca.git and verify that the documented workflow can locate and execute reformat, or that the documentation accurately describes its availability.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
build-system
Issue type
Bug
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
35/100

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