The dependent versions of anndata and scipy are too old
Open
- Dominant language
- Python
- Stars
- 50
- Forks
- 17
- Avg merge
- 1d 4h
- Merged PRs (30d)
- 3
Description
When I import besca with a lot of packages, the dependend package version should support the newest version.
Such as, the anndata version 0.11+ changed the SparseCSRView class to new class; scipy.io.mmio.MMFile class has changed into C++ backend
Could you check the version relationship of the dependent packages?
Contributor guide
No contributing guide indexed for this repository
Research direction
Start by locating BESCA's dependency declarations and the import paths that use anndata and scipy. Check compatibility with anndata 0.11+ and the current scipy APIs, then verify that importing besca works alongside the newest supported dependency versions.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- data
- Issue type
- Bug
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 35/100