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aschampion

8 indexed repositories · View on GitHub

diluvian
Flood filling networks for segmenting electron microscopy of neural tissue

Python · 26 stars
rust-n5
Rust implementation of the N5 "Not HDF5" tensor file system format

Rust · 17 stars
h2n5
HTTP 2 N5: Serve N5 datasets over HTTP as tiled image stacks

Rust · 7 stars
schemer
A database schema migration library with DAG dependencies

Rust · 6 stars
n5-wasm
WASM bindings to the Rust implementation of N5

Rust · 4 stars
n5gest
CLI utilities for N5 files

Rust · 3 stars
rust-zarr

0 stars
heraclitus
[ABANDONED] A framework for the specification, persistence, and production of dependent, versioned, derived data artifacts

Rust · 0 stars

Beginner friendly Everything

Open All

`schemer-rusqlite`: Missing instructions or automated initialization: `no such table: _schemer` Open

Difficulty 3/5 1-2 days Newbie friendliness 45/100

aschampion/schemer#22 · Opened Aug 19, 2023
Some feature/change requests Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

aschampion/schemer#18 · 2 comments · Opened Jan 28, 2023
Support HEAD requests Open

Difficulty 3/5 1-2 days Newbie friendliness 48/100

aschampion/h2n5#68 · Opened Jun 14, 2022
Update wasm-bindgen for perf improvements Open

Difficulty 2/5 1-3 hours Newbie friendliness 48/100

aschampion/n5-wasm#3 · Opened Feb 8, 2022
import: accept more file paths Open

Difficulty 4/5 3-5 days Newbie friendliness 35/100

aschampion/n5gest#101 · 1 comment · Opened Jan 28, 2022
Prettytable panics when piped output does not consume everything Open

bug

Difficulty 3/5 1-2 days Newbie friendliness 35/100

aschampion/n5gest#100 · Opened Oct 12, 2021
Bounded coord iter does not clamp BB to dataset extents Open

bug

Difficulty 3/5 1-2 days Newbie friendliness 35/100

aschampion/rust-n5#48 · Opened Dec 22, 2020
`N5Reader::block_exists` Open

Difficulty 3/5 1-2 days Newbie friendliness 20/100

aschampion/rust-n5#47 · Opened Jul 31, 2020
Advantages over Cloud Optimized Geotiff ? Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

aschampion/h2n5#67 · 2 comments · Opened Jul 24, 2020
Remove all `as` casts and unchecked coords arithmetic Open

breaking

Difficulty 4/5 3-5 days Newbie friendliness 32/100

aschampion/rust-n5#46 · Opened Jul 19, 2020
Extension traits for state metadata Open

Difficulty 5/5 Over a week Newbie friendliness 15/100

aschampion/rust-n5#43 · Opened Jun 4, 2020
Zarr fork and blockd/big chunkus issues Open

Difficulty 5/5 Over a week Newbie friendliness 15/100

aschampion/rust-n5#42 · 2 comments · Opened May 29, 2020
Convert all flags to kebab case Open

breaking

Difficulty 3/5 1-2 days Newbie friendliness 25/100

aschampion/n5gest#95 · Opened Jan 25, 2020
Switch to absolute paths Open

breaking

Difficulty 4/5 3-5 days Newbie friendliness 25/100

aschampion/rust-n5#40 · Opened Jan 23, 2020
Occupied block operations Open

Difficulty 4/5 3-5 days Newbie friendliness 35/100

aschampion/n5gest#94 · Opened Jan 23, 2020
Integer reblocking Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

aschampion/n5gest#93 · Opened Jan 23, 2020
Switch from meval to fasteval Open

Difficulty 3/5 1-2 days Newbie friendliness 45/100

aschampion/n5gest#89 · Opened Jan 17, 2020
Consider tinyvec replacement for smallvec Open

breaking

Difficulty 5/5 Over a week Newbie friendliness 20/100

aschampion/rust-n5#39 · Opened Jan 17, 2020
Dataset/group objects and index traits for h5py like API Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

aschampion/rust-n5#38 · Opened Jan 17, 2020
Block interfaces for iterators Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

aschampion/rust-n5#37 · Opened Jan 17, 2020
Intermittent SIGKILL on `cargo bench simple` Open

Difficulty 4/5 3-5 days Newbie friendliness 20/100

aschampion/rust-zarr#5 · 1 comment · Opened Dec 31, 2019
Miscellaneous uncommented TODOs Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

aschampion/rust-zarr#4 · Opened Dec 19, 2019
Tracking: changes to zarr v3 spec Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

aschampion/rust-zarr#3 · 1 comment · Opened Dec 17, 2019
Spec differences for the zarr-n5 shim Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

aschampion/rust-zarr#2 · Opened Dec 10, 2019
Discussion: what is at the bottom of our stack? Open

Difficulty 5/5 Over a week Newbie friendliness 15/100

aschampion/rust-zarr#1 · Opened Dec 10, 2019
Regex should be cached with lazy_static or once_cell Open

enhancement

Difficulty 2/5 1-3 hours Newbie friendliness 42/100

aschampion/h2n5#45 · Opened Oct 29, 2019
Log errors Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

aschampion/h2n5#44 · 2 comments · Opened Oct 12, 2019
N5PromiseReader::exists should should resolve to false rather than reject on 404 Open

Difficulty 2/5 1-3 hours Newbie friendliness 45/100

aschampion/n5-wasm#2 · Opened Jul 31, 2019
register_multiple should take Iterator or slice, not Vec Open

enhancement good first issue

Difficulty 2/5 1-3 hours Newbie friendliness 25/100

aschampion/schemer#12 · Opened Jul 21, 2019
Remove redundant interface/datatype reflection enums Open

Difficulty 5/5 Over a week Newbie friendliness 15/100

aschampion/heraclitus#2 · Opened Jul 20, 2019
Should have some way to force opening when version is not present Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

aschampion/rust-n5#25 · Opened Jun 15, 2019
N5Reader/Writer method that take impl Read/Write respectively Open

Difficulty 3/5 1-2 days Newbie friendliness 35/100

aschampion/rust-n5#22 · Opened Jun 13, 2019
setup.py doesn't work Open

Difficulty 4/5 3-5 days Newbie friendliness 20/100

aschampion/diluvian#23 · Opened Mar 28, 2019
Endpoint for CATMAID-importable stack JSON Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

aschampion/h2n5#18 · Opened Nov 9, 2018
Occupied block listing/iterator Open

Difficulty 4/5 3-5 days Newbie friendliness 30/100

aschampion/rust-n5#17 · Opened Oct 7, 2018
Factor reading block headers Open

Difficulty 3/5 1-2 days Newbie friendliness 35/100

aschampion/rust-n5#16 · 1 comment · Opened Oct 7, 2018
Async traits Open

enhancement

Difficulty 5/5 Over a week Newbie friendliness 25/100

aschampion/rust-n5#9 · 1 comment · Opened Jul 31, 2018
Errors should not use HTTP status reason string Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

aschampion/h2n5#1 · Opened Jul 23, 2018
Adhere to Rust API Guidelines when reasonable Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

aschampion/rust-n5#6 · Opened Mar 20, 2018
Test against Java N5 files in CI Open

enhancement

Difficulty 4/5 3-5 days Newbie friendliness 20/100

aschampion/rust-n5#3 · Opened Mar 1, 2018
Concurrent impl/tests Open

enhancement

Difficulty 5/5 Over a week Newbie friendliness 10/100

aschampion/rust-n5#2 · Opened Mar 1, 2018
HTTP/URL backend Open

enhancement

Difficulty 5/5 Over a week Newbie friendliness 10/100

aschampion/rust-n5#1 · Opened Mar 1, 2018
Adapter for dgraph Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

aschampion/schemer#6 · Opened Nov 26, 2017
Results/errors should be tested Open

Difficulty 3/5 1-2 days Newbie friendliness 25/100

aschampion/schemer#4 · Opened Nov 26, 2017
schemer-cli Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

aschampion/schemer#3 · 1 comment · Opened Nov 21, 2017
Training and prediction of the "CREMI" data set. PART 2 Open

Difficulty 4/5 3-5 days Newbie friendliness 20/100

aschampion/diluvian#13 · 5 comments · Opened Sep 7, 2017
Multi GPU fn's should optionally take list of devices instead of GPU count Open

enhancement

Difficulty 5/5 Over a week Newbie friendliness 15/100

aschampion/diluvian#8 · Opened May 30, 2017
Optional noise/dropout in mask input channel for robustness training Open

enhancement

Difficulty 4/5 3-5 days Newbie friendliness 20/100

aschampion/diluvian#7 · Opened May 29, 2017
Support dilated conv layers Open

enhancement

Difficulty 5/5 Over a week Newbie friendliness 25/100

aschampion/diluvian#6 · Opened May 23, 2017
Coalesce adjacent partitions Open

enhancement

Difficulty 5/5 Over a week Newbie friendliness 15/100

aschampion/diluvian#4 · Opened May 23, 2017

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