aolabNeuro / aolabNeuro/analyze

(still updating) New environment: possible import/update bugs

Aperta
#413 3 commenti 0 reazioni 0 assegnatari Vedi su GitHub
bug
Lingua principale
Python
Stelle
7
Fork
0
Merge medio
22h 29m
PR unite (30g)
2

Descrizione

when importing aopy:

1. "module compiled against API version 0x10 but this version of numpy is 0xe"
(resolved with `$pip install numpy --upgrade`)

2. `File "/home/aolab/miniconda3/envs/ryanwang-analysis/lib/python3.9/site-packages/numpy/__init__.py", line 322, in __getattr__
raise AttributeError("module {!r} has no attribute "
AttributeError: module 'numpy' has no attribute 'typeDict'`
resolved by conda installing h5py

3. `File ~/ryanwang/analyze/aopy/data/base.py:5`(`import tables`)
`File ~/miniconda3/envs/ryanwang-analysis/lib/python3.9/site-packages/tables/__init__.py:99`
`File tables/utilsextension.pyx:169, in init tables.utilsextension()`
`ImportError: cannot import name typeDict`
resolved by upgrading tables
(`$pip install tables --upgrade`)

4. `Unexpected exception formatting exception. Falling back to standard exception`
`File "/home/aolab/ryanwang/analyze/aopy/data/base.py", line 5, in
import tables`
` File "/home/aolab/miniconda3/envs/ryanwang-analysis/lib/python3.9/site-packages/tables/__init__.py", line 32, in
from .utilsextension import get_hdf5_version as _get_hdf5_version`
`File "tables/utilsextension.pyx", line 169, in init tables.utilsextension`
`ImportError: cannot import name typeDict`

`During handling of the above exception, another exception occurred:`
`File "/home/aolab/miniconda3/envs/ryanwang-analysis/lib/python3.9/site-packages/executing/executing.py", line 164, in only
raise NotOneValueFound('Expected one value, found 0')
executing.executing.NotOneValueFound: Expected one value, found 0`
(this is the same error as 3, plus new issues with updated package)

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