angelolab / angelolab/ark-analysis
Updating deepcell_visualization files after filtering for too small/too big cells from the cell table
未关闭
enhancement
- 主要语言
- Jupyter Notebook
- 星标
- 108
- 派生
- 31
- PR 合并指标
- 30 天内没有已合并 PR
描述
After running Mesmer/deep cells, we are usually plotting the cell size from the cell_table csv and excluding cells below/above a certain threshold. Is there an option that we could update the deppcell visualization images after this removal so that the cells we have excluded won't be anymore shown as segmented cells in the image? That would be great if you could implement this in your notebook. Thanks
贡献指南
这个仓库没有索引到贡献指南
评估
这个 Issue 还没有评估数据。