RosettaCommons / RosettaCommons/rosetta

-parser:info not functional with ligand docking setup tags

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Dominant language
C++
Stars
470
Forks
169
Avg merge
16d 23h
Merged PRs (30d)
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Description

This is more tracking of a feature request/missing feature than something that needs fixing. The documentation also has the information needed.

The following is true for LigandArea, ClassicGrid, InterfaceBuilder, and MoveMapBuilder.

The rosetta_scripts application was used with the -parser:info flag.
Writing options for the indicated movers/filters/task operations/residue selectors/simple metrics/constraint generators/packer palettes:
--------------------------------------------------------------------------------
"LigandArea" not found!
--------------------------------------------------------------------------------
Warning: the following are not movers, filters, task operations, residue selectors, simple metrics, constraint generators, or packer palettes; no information could be found for these:
LigandArea

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start with the rosetta_scripts application and the -parser:info entry point, then trace how setup tags such as LigandArea, ClassicGrid, InterfaceBuilder, and MoveMapBuilder are recognized. The work is done when -parser:info reports information for these tags instead of showing them as not found; use the existing documentation as the reference for expected information.

Written by the indexing model from the issue text.

Assessment

Tech stack
cpp
Domain
bioinformatics, cli
Issue type
Feature
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
35/100

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