Project-MONAI / Project-MONAI/MONAILabel

Set up MONAILabel with XNAT for training

Open
#1,339 0 comments 0 reactions 0 assignees View on GitHub

Nobody has claimed this yet.

Dominant language
Python
Stars
891
Forks
269
Avg merge
15h 41m
Merged PRs (30d)
1

Description

MONAI Integration with XNAT

Hi Team,

I am building a few working prototypes for our key customers -- hospitals and research institute -- in APJ area, to help them set up a training & inference work environment for medical imaging. Their preference is to have XNAT and MONAI Label as for front end and servers respectively. Until now, we have already successfully connected XNAT and MONAI Label for inference. However, my customer cannot complete the training process due to some components are not processed yet within MONAI Label.

Can I request the team to help to prioritise this activity so that we can get this pipeline running end to end?

Many Thanks

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

The issue provides no files, tests, or specific components to inspect. Start by identifying the existing XNAT-to-MONAI Label inference integration and determining which training components are missing. Done means an end-to-end XNAT and MONAI Label training pipeline works for the described medical-imaging workflow.

Written by the indexing model from the issue text.

Assessment

Tech stack
python, pytorch
Domain
backend, machine-learning
Issue type
Feature
Difficulty
5/5
Estimated time
Over a week
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
20/100

Get new issues in your inbox

A short digest of beginner-friendly GitHub issues.