PEtab-dev / PEtab-dev/libpetab-python

Support for discrete noise distributions

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Dominant language
Python
Stars
18
Forks
9
PR merge metrics
No merged PRs in 30d

Description

After https://github.com/PEtab-dev/PEtab/pull/654.

  • Extend distribution enums
  • Add new classes to distributions.py
  • Add continuous/discrete flag to Observable and Distribution.
  • Validation for integer measurements of discrete observables

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Begin by reviewing the changes in PEtab PR 654 and the existing distribution enums and distributions.py. Trace how Observable and Distribution currently represent distributions, then determine where integer-measurement validation belongs. Done means discrete distributions and classes are supported, both objects expose the continuous/discrete distinction, and integer measurements are validated.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
data
Issue type
Feature
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
35/100

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