OpenCloning / OpenCloning/OpenCloning_backend
Sequence topology restrictions for assemblies
Open
Nobody has claimed this yet.
- Dominant language
- Python
- Stars
- 8
- Forks
- 11
- Avg merge
- 14m
- Merged PRs (30d)
- 5
Description
Can something like this happen in an homology-based assembly? Clearly yes for a restriction assembly.
PS: What would happen if there are two circular molecules involved?
Contributor guide
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First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by reviewing the issue's example image and the current handling of homology-based and restriction assemblies. Determine the intended topology rules for restriction assemblies and for cases involving two circular molecules. Done means the supported cases and expected behavior are clearly defined and implemented with corresponding verification.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- backend
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 20/100