OpenCloning / OpenCloning/OpenCloning_backend

Optional ids on Sequences and Sources?

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Dominant language
Python
Stars
8
Forks
11
Avg merge
14m
Merged PRs (30d)
5

Description

They should not be optional, but at the same time it's awkward to set them in the backend if they are not going to be used (see format_sequence_genbank)

Contributor guide

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First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by reviewing the Sequence and Source ID handling in the backend, including the format_sequence_genbank path mentioned in the issue. Determine the intended behavior for IDs that are required by the model but may not be used by a backend operation. Done means the optional-versus-required behavior is clearly resolved and consistently represented.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
backend
Issue type
Feature
Difficulty
5/5
Estimated time
Over a week
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
25/100

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