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MetaCell

25 indexed repositories · View on GitHub

nwb-explorer
NWB Explorer is a web application to visualise and analyse the content of NWB:N 2 files

JavaScript · 27 stars
NetPyNE-UI
NetPyNE User interface

JavaScript · 23 stars
cloud-harness

Python · 19 stars
NEURON-UI
NEURON User Interface

AMPL · 18 stars
geppetto-netpyne
Geppetto extension for NetPyNE

JavaScript · 6 stars
geppetto-meta

JavaScript · 6 stars
sds-viewer
SDS Viewer

JavaScript · 4 stars
geppetto-scidash
Geppetto scidash extension

JavaScript · 3 stars
geppetto-NeuroSCAN
Yale NeuroSCAN & Promoter DB Project

JavaScript · 3 stars
interlex

JavaScript · 3 stars
jupyter-neuron-docker
Docker file for Jupyter Notebook and NEURON

Dockerfile · 2 stars
scidash-api
SciDash Python API to interact with the SciDash backend from any Python environment

Jupyter Notebook · 2 stars
scidash
SciDash entry point

Python · 2 stars
salk-interactive-atlas

TypeScript · 2 stars
HNN-UI
HNN User Interface

Python · 2 stars
virtual-fly-brain

JavaScript · 2 stars
social-lab
Social Lab

CSS · 1 star
geppetto-hnn
Geppetto extension for HNN

JavaScript · 1 star
geppetto-nwbexplorer

HTML · 1 star
java-virgo-maven
Repo that hosts a dockerfile with Java, Eclipse Virgo and Maven preinstalled

Shell · 1 star
5 more repositories live on View on GitHub

Beginner friendly Everything

Open All

Add ISBN citation support to reference/provenance Open

Priority Low

MetaCell/sckan-composer#400 · 7 comments · 1 assignee · Opened Dec 20, 2024
Create banner to indicate system downtime messages Open

Design required Priority Low

Difficulty 4/5 3-5 days Newbie friendliness 35/100

MetaCell/sckan-composer#399 · 1 reaction · Opened Dec 19, 2024
Improve statement and sentences list search component Open

Requirements required

MetaCell/sckan-composer#392 · 3 comments · 1 assignee · Opened Dec 13, 2024
Highlight broken links of the graph Open

Priority Normal

MetaCell/sckan-composer#388 · 2 comments · 1 assignee · Opened Dec 11, 2024
Origin and Destinations appear as undefined/blank on Check for Duplicates Open

bug imported from jira

Difficulty 3/5 1-2 days Newbie friendliness 30/100

MetaCell/sckan-composer#386 · Opened Dec 11, 2024
Export a single sentence and it's draft statements based on state machine, "ready to review" Open

Design required enhancement

MetaCell/sckan-composer#376 · 1 comment · 2 assignees · Opened Dec 9, 2024
Improve exported Tag visibility in admin interface Open

Priority Normal

MetaCell/sckan-composer#375 · 1 comment · 1 assignee · Opened Dec 9, 2024
Add system notes when locking the graph/diagram Open

Priority Normal

MetaCell/sckan-composer#363 · 3 comments · 1 assignee · Opened Nov 20, 2024
duplicate KS not working Open

bug imported from jira Priority Normal

MetaCell/sckan-composer#347 · 2 comments · 1 assignee · Opened Oct 30, 2024
Feature: side bar functionality Open

Estimate needed Priority required Requirements required

MetaCell/sckan-composer#346 · 8 comments · 2 assignees · Opened Oct 29, 2024
New Citations should change the state of a KS Open

Design required Priority required Requirements required

MetaCell/sckan-composer#341 · 1 comment · 1 assignee · Opened Oct 23, 2024
Enhance search basing it on keywords Open

Priority required

MetaCell/sckan-composer#338 · 1 comment · 1 assignee · Opened Oct 23, 2024
When hovering the icon notes in the list component get a tooltip with a previous of the last 3 comments (or max number of characters) Open

Design required Priority required

MetaCell/sckan-composer#337 · 1 comment · 1 assignee · Opened Oct 23, 2024
Download graph Open

Priority Low Requirements required

MetaCell/sckan-composer#335 · 4 comments · 1 assignee · Opened Oct 23, 2024
Implement error/warning dialog to handle any response different from 200 from the rest api Open

Design required Priority required

MetaCell/sckan-composer#334 · 2 comments · 2 assignees · Opened Oct 23, 2024
Connect NLP ingestion to the admin interface Open

Design required Priority Normal

MetaCell/sckan-composer#333 · 6 comments · 2 assignees · Opened Oct 23, 2024
Revisit state transition to improve usability Open

Design required Priority required Requirements required

MetaCell/sckan-composer#332 · 2 comments · 1 assignee · Opened Oct 23, 2024
Connect anatomical entities retrieval to SciCrunch Open

Priority required Requirements required

MetaCell/sckan-composer#330 · 2 comments · 1 assignee · Opened Oct 23, 2024
Collapsible left sidebar with the menu Open

Design required Priority required

MetaCell/sckan-composer#329 · 1 comment · 1 assignee · Opened Oct 23, 2024
NWB from DANDI no longer load? Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

MetaCell/nwb-explorer#340 · 5 comments · Opened Oct 18, 2024
[feature request] when refreshing page, return to the tab that was displayed (distillation/proofing) Open

Priority Normal

Difficulty 3/5 1-2 days Newbie friendliness 48/100

MetaCell/sckan-composer#320 · 1 comment · Opened Oct 16, 2024
Exploration Notes: findings on Open Policy Agent Open

Difficulty 5/5 Over a week Newbie friendliness 10/100

MetaCell/cloud-harness#781 · 1 comment · Opened Oct 15, 2024
[Feature] provide count of records with a particular tag Open

Design required Priority required Requirements required

MetaCell/sckan-composer#310 · 1 comment · 1 assignee · Opened Oct 6, 2024
Drop-down arrow when state maching button label is the only option is confusing Open

Priority Normal

MetaCell/sckan-composer#309 · 2 comments · 1 assignee · Opened Oct 6, 2024
[Feature request] Make species URI a unique identifier in the model, so 2 species cannot have the same URI Open

Priority Low

MetaCell/sckan-composer#307 · 10 comments · 1 assignee · Opened Oct 5, 2024
Ingested statements should be marked as invalid if there is no origin specified in the path builder Open

Priority required Requirements required

MetaCell/sckan-composer#305 · 5 comments · 1 assignee · Opened Oct 5, 2024
connect neurondm ingestion to the admin interface Open

Priority required Requirements required

MetaCell/sckan-composer#297 · 3 comments · 1 assignee · Opened Sep 18, 2024
Use NLP-ID for forward connection label, not Neuron population label in Path Builder Open

Design required Priority required

MetaCell/sckan-composer#296 · 5 comments · 1 assignee · Opened Sep 18, 2024
Feature request: provide expanded space in the population diagram window Open

Design required Priority required

MetaCell/sckan-composer#292 · 3 comments · 1 assignee · Opened Aug 27, 2024
CNS24 Tutorial - Issues Open

MetaCell/NetPyNE-UI#829 · 2 comments · 3 assignees · Opened Jul 5, 2024
Feature Request: add the ability to add provenance to each component of proofing Open

Difficulty 5/5 Over a week Newbie friendliness 30/100

MetaCell/sckan-composer#284 · Opened Jun 6, 2024
Camera controls interrupting mouse control behavior on Canvas Open

Difficulty 3/5 1-2 days Newbie friendliness 38/100

MetaCell/geppetto-meta#535 · Opened Apr 30, 2024
Research on IndexedDB to pass instances instead of using window object Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

MetaCell/geppetto-meta#533 · Opened Mar 27, 2024
Example redux-react-app doesn't compile Open

Difficulty 1/5 Under an hour Newbie friendliness 68/100

MetaCell/geppetto-meta#531 · Opened Mar 22, 2024
pools are not rendering in the graph view Open

Difficulty 4/5 3-5 days Newbie friendliness 30/100

MetaCell/sds-viewer#218 · Opened Mar 15, 2024
data upload time Open

needs more information question SOW6

MetaCell/salk-interactive-atlas#375 · 2 comments · 1 assignee · Opened Jan 19, 2024
Experiments available when new account is created Open

question SOW6

MetaCell/salk-interactive-atlas#374 · 2 comments · 1 assignee · Opened Jan 19, 2024
Suggest to the client that neurons can be clicked on Open

enhancement SOW6

MetaCell/salk-interactive-atlas#373 · 6 comments · 1 assignee · Opened Jan 19, 2024
Project Description Open

enhancement SOW6

MetaCell/salk-interactive-atlas#372 · 6 comments · 1 assignee · Opened Jan 19, 2024
Share experiment feature during creation Open

enhancement SOW6

MetaCell/salk-interactive-atlas#371 · 5 comments · 1 assignee · Opened Jan 19, 2024
2D visualizer Z position visualisation -SOW6- Open

enhancement SOW6

MetaCell/salk-interactive-atlas#370 · 8 comments · 1 assignee · Opened Jan 19, 2024
Admin typo fix: Species Open

Difficulty 1/5 Under an hour Newbie friendliness 50/100

MetaCell/sckan-composer#198 · 3 comments · Opened Dec 21, 2023
3D positions of cells being displayed incorrectly Open

Difficulty 4/5 3-5 days Newbie friendliness 42/100

MetaCell/NetPyNE-UI#794 · 2 comments · Opened Dec 19, 2023
M1 model does not show cell density and shows error in Spatial Distribution panel Open

MetaCell/NetPyNE-UI#793 · 1 comment · 1 assignee · Opened Dec 13, 2023
Netpyne model 267184 import issue Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

MetaCell/NetPyNE-UI#791 · Opened Dec 11, 2023
Fix node only dependency: Buffer Open

MetaCell/meta-diagram#66 · 1 assignee · Opened Dec 7, 2023
Allow making an experiment public through the UI Open

enhancement

Difficulty 3/5 1-2 days Newbie friendliness 20/100

MetaCell/salk-interactive-atlas#363 · 1 comment · Opened Dec 6, 2023
Add feedback when failing to delete/edit an experiment Open

enhancement

Difficulty 3/5 1-2 days Newbie friendliness 35/100

MetaCell/salk-interactive-atlas#358 · Opened Dec 6, 2023
Experiment deletion is not deleting all the storage files associated with the experiment Open

enhancement

Difficulty 3/5 1-2 days Newbie friendliness 35/100

MetaCell/salk-interactive-atlas#357 · Opened Dec 6, 2023
Edit tags is crashing the application Open

bug

MetaCell/salk-interactive-atlas#356 · 1 assignee · Opened Dec 6, 2023

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