MetaCell / MetaCell/NetPyNE-UI

What is threshold for detailed rendering of cell?

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Dominant language
JavaScript
Stars
23
Forks
10
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No merged PRs in 30d

Description

In image below cell on left has ~4400 3D points, cell on right has ~5800. What is the threshold for rendering the cell with lines/circles as on right? Can it be changed when NetPyNE is live to show all in full 3D?

Screenshot from 2022-12-06 19-50-27

FYI model was imported from NeuroML file here: https://github.com/sanjayankur31/Human-L2-3-Cortical-Microcircuit/blob/feat/neuroml/NeuroML2/TestNetwork.net.nml (requires new release of pyNeuroML to fix issue with space in path: https://github.com/OpenSourceBrain/OSBv2/issues/601)

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Research direction

Start by reproducing the reported rendering difference with the linked NeuroML model and locating the UI entry point that decides between detailed and simplified cell rendering. Determine the current point threshold and whether it can be changed while NetPyNE is live. Done means the threshold behavior and any supported live configuration are clearly established.

Written by the indexing model from the issue text.

Assessment

Tech stack
javascript
Domain
computer-graphics, frontend
Issue type
Feature
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
25/100

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