Medical-Event-Data-Standard / Medical-Event-Data-Standard/MEDS-DEV

[Model] Add the model CORE-BEHRT

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BLOCKED enhancement help wanted Models priority:medium
Dominant language
Python
Stars
43
Forks
10
PR merge metrics
No merged PRs in 30d

Description

https://github.com/FGA-DIKU/EHR?tab=readme-ov-file#getting-started provides good instructions for working with MEDS.

The only issue may be the label schema format.

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start with the MEDS Getting Started instructions linked in the issue, then review how the project currently represents and evaluates models. Clarify how CORE-BEHRT should be integrated and resolve the label schema format before starting; done means the model is added with compatible labels and reproducible evaluation.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
machine-learning
Issue type
Feature
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
30/100

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