Imageomics / Imageomics/TreeOfLife-toolbox
Generate TreeOfLife Documentation
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@thompsonmj is already working on this.
Since Apr 22, 2025.
documentation
- Dominant language
- Jupyter Notebook
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Description
We need proper documentation under a docs/ folder or potentially a MkDocs site since this is going to be quite large and complex. This will include:
- Purpose of these tools (generation of TreeOfLife-200M, etc.)
- How these tools fit into the processing (i.e., download with distributed-downloader, then the filtering, processing, etc.)
- This repo will contain multiple processing stages from simpler initial source dataset-specific (EOL, GBIF, BIOSCAN, FathomNet, LILA) to more use-case specific and overall dataset creation.
- Where include relation to TaxonoPy.
- This will be the Reproduce the dataset repo.
- How each tool works, their uses, etc.
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