Imageomics / Imageomics/TaxonoPy

IO inaccuracies in documentation

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documentation
Dominant language
Python
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Description

  • scientific_name is a required input field. It may be null, but the column must be present for validation. Current docs describe it as optional, which is misleading as-is.
  • input columns should mention source_id
  • output files documentation implies a .resolved and .unsolved file will always be written for every resolve command input. But resolve might not include .unsolved if everything that is written goes into .resolved (misleading as-is). Also forgot to mention .forced.
  • --full-rerun doesn't affect common names manifest. This functionality (or lack thereof) should be clarified, and separately decided on whether or not it should exist in some form.

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First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Locate the documentation for input columns, resolve outputs, and the --full-rerun option, then verify each statement against the current command behavior. Update the docs to describe nullable-but-required scientific_name, source_id, conditional .resolved/.unsolved outputs, and .forced; record the actual common-names manifest behavior while the separate feature decision is resolved.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
documentation
Issue type
Documentation
Difficulty
3/5
Estimated time
1-2 days
Activity status
Quiet
Clarity
Mostly clear
Newbie friendliness
55/100

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