Imageomics / Imageomics/SST

Develop documentation

Open
#24 0 comments 2 reactions 0 assignees View on GitHub

Nobody has claimed this yet.

documentation
Dominant language
Jupyter Notebook
Stars
14
Forks
3
PR merge metrics
No merged PRs in 30d

Description

Following #22, a simple documentation site should be initiated. Preference is Zensical.

Components to add on first pass include:

  • Quick reference: Worked example starting from existing masks
    • A sub-page illustrating how to generate the first mask using a few tools (napari, X-AnyLabeling, Label Studio, Fiji). At least one should go into the first docs produced. Additional examples can be added in subsequent issues.
  • Installation
  • IO: format specifications for what comes into SST and what is produced
  • Acknowledgements

Contributor guide

No contributing guide indexed for this repository

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start with issue #22 and the Zensical getting-started documentation to determine how the documentation site should be initiated. Build the first pass around Quick reference, Installation, IO, and Acknowledgements, including at least one worked mask-generation example using one of napari, X-AnyLabeling, Label Studio, or Fiji. Done means the site exists with these initial sections and the example is usable.

Written by the indexing model from the issue text.

Assessment

Domain
documentation
Issue type
Documentation
Difficulty
4/5
Estimated time
3-5 days
Activity status
Quiet
Clarity
Mostly clear
Newbie friendliness
45/100

Get new issues in your inbox

A short digest of beginner-friendly GitHub issues.