Owner

GSTT-CSC

11 indexed repositories · View on GitHub

QMS-Template
Template QMS for SaMD and AIaMD

80 stars
TotalSegmentator-AIDE
TotalSegmentator packaged as an AIDE Application, based on the MONAI Application Package (MAP) standard.

Python · 34 stars
hazen
Quality assurance framework for Magnetic Resonance Imaging

Python · 33 stars
MLOps
Framework for building ML apps

Python · 23 stars
XNAT
Tracks general documentation, standard operating procedures (SOP) and helper scripts for XNAT.

Python · 8 stars
gstt-csc.github.io
CSC Website

HTML · 5 stars
XNAT-NHS-User-Group
General documentation and helper scripts for NHS XNAT User Group.

3 stars
MLOps-tutorial
Example project using csc-mlops

Python · 1 star
project-template
Template for new projects

Python · 1 star
hazen-web-app
Interactive web-based implementation of hazen

Python · 0 stars
NHSFCAI

SCSS · 0 stars

Open All

Improve integration of TotalSegmentator with MONAI Deploy Open

GSTT-CSC/TotalSegmentator-AIDE#7 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Change READMEs for MAP and MAP-init Open

GSTT-CSC/TotalSegmentator-AIDE#14 · 1 comment · 1 reaction · 0 assignees · Indexed Sep 17, 2026
Add installation of dcm2niix in README setup instructions Open

documentation good first issue

GSTT-CSC/TotalSegmentator-AIDE#20 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Add GitHub Action to publish MAP(s) on GHCR Open

GSTT-CSC/TotalSegmentator-AIDE#24 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Add MAP end-to-end testing GitHub Action Open

GSTT-CSC/TotalSegmentator-AIDE#25 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Add checks/Exceptions to MAP if TotalSegmentator contours are empty Open

GSTT-CSC/TotalSegmentator-AIDE#29 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Create __version__.py Open

GSTT-CSC/TotalSegmentator-AIDE#30 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Raise Exceptions to AIDE UI via metadata.json Open

GSTT-CSC/TotalSegmentator-AIDE#33 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Enhance db session functionality Open

enhancement Low Priority

GSTT-CSC/hazen-web-app#11 · 2 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
set up and add a MAIL SERVER to the application for password reset functionality Open

enhancement Low Priority

GSTT-CSC/hazen-web-app#51 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Update number of files column in Workbench HTML table upon data upload Open

GSTT-CSC/hazen-web-app#54 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Update README with guide on how to contribute to documentation Open

documentation good first issue Low Priority

GSTT-CSC/hazen-web-app#57 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Improve implementation of SNR Task Open

Medium Priority

GSTT-CSC/hazen-web-app#75 · 2 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Add task progress indicator and trigger page refresh once done Open

enhancement High Priority

GSTT-CSC/hazen-web-app#80 · 2 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Set up AWS deployment using GH Actions Open

GSTT-CSC/hazen-web-app#93 · 2 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
SNR task unite uploaded image Open

GSTT-CSC/hazen-web-app#113 · 4 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Home page improvement Open

GSTT-CSC/hazen-web-app#122 · 2 comments · 0 reactions · 1 assignee · Indexed Sep 17, 2026
How to get started/tutorial Open

GSTT-CSC/hazen-web-app#126 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Uploader improvements Open

GSTT-CSC/hazen-web-app#127 · 2 comments · 0 reactions · 1 assignee · Indexed Sep 17, 2026
User-specific filtering Open

GSTT-CSC/hazen-web-app#128 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 17, 2026
Task processing Open

GSTT-CSC/hazen-web-app#134 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Task selection Open

GSTT-CSC/hazen-web-app#135 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Workbench - Available dataset Open

GSTT-CSC/hazen-web-app#136 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Display measurement results Open

GSTT-CSC/hazen-web-app#137 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 17, 2026
Display measurement images Open

GSTT-CSC/hazen-web-app#138 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 17, 2026
Reports page Open

GSTT-CSC/hazen-web-app#139 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 17, 2026
Secure passwords Open

GSTT-CSC/hazen-web-app#147 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Intended use disclaimer Open

GSTT-CSC/hazen-web-app#148 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Remove user accounts after pre-defined period of inactivity Open

GSTT-CSC/hazen-web-app#150 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
MLOps release process Open

GSTT-CSC/MLOps-tutorial#4 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
add tune example Open

GSTT-CSC/MLOps-tutorial#5 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Add AIF360 example Open

GSTT-CSC/MLOps-tutorial#6 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
'Run the training' error Open

GSTT-CSC/MLOps-tutorial#7 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Pin setuptools to avoid mlflow import failure (pkg_resources missing) Open

GSTT-CSC/MLOps-tutorial#13 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Docker build fix: remove unavailable software-properties-common Open

GSTT-CSC/MLOps-tutorial#14 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Utils/visualise can create an IndexError Open

GSTT-CSC/MLOps-tutorial#15 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
[General Issue]: Recommended to add the requirements of IEC 82304-1 Open

GSTT-CSC/QMS-Template#8 · 1 comment · 1 reaction · 0 assignees · Indexed Sep 17, 2026
create terms of reference read.me Open

GSTT-CSC/XNAT-NHS-User-Group#1 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 17, 2026
[Minutes] - Monthly Meeting - 28-10-2025 Open

GSTT-CSC/XNAT-NHS-User-Group#3 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
[Minutes] - Monthly Meeting - 25-11-2025 Open

GSTT-CSC/XNAT-NHS-User-Group#4 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Need to add topics to each past date Open

GSTT-CSC/XNAT-NHS-User-Group#6 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 17, 2026
Reverse proxy to host multiple apps on headnode Open

enhancement

GSTT-CSC/XNAT#22 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Automate reporting on data processing and transfers Open

enhancement

GSTT-CSC/XNAT#27 · 0 comments · 1 reaction · 0 assignees · Indexed Sep 17, 2026
Add SOP for GitHub Open

documentation good first issue

GSTT-CSC/XNAT#43 · 1 comment · 1 reaction · 0 assignees · Indexed Sep 17, 2026
Create an error log to track issues and known solutions Open

documentation good first issue

GSTT-CSC/XNAT#44 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Need a trackable way for users to report issues Open

documentation good first issue

GSTT-CSC/XNAT#57 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Anonymisation script generator Open

enhancement

GSTT-CSC/XNAT#65 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Introduce modality-specific anonymisation modules Open

enhancement

GSTT-CSC/XNAT#78 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
XNAT doesn't process fused PET images Open

bug

GSTT-CSC/XNAT#79 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Should add paeds defacing to resources Open

enhancement

GSTT-CSC/XNAT#80 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026

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