EpistasisLab / EpistasisLab/Aliro

Load knowledgebase from zipped json file of pd.DataFrame

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#238 5 comments 0 reactions 0 assignees View on GitHub
enhancement
Dominant language
JavaScript
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Description

![image](https://user-images.githubusercontent.com/21084970/72542523-4ab3ea00-3852-11ea-8def-2e95f40fff08.png)

Instead of using tsv file, we can use pickle file (which was per-generated from pd.DataFrame) to load the results into AI. This way is very fast because no `eval` process is needed for converting parameters into python dictionary. The dictionary format can be pickled within pd.DataFrame.

But there is one issue about using pickle on regression knowledgebase: the pickle file is over 200Mb due to its large amounts of results while classification's knowledgebase is only 8Mb.

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