ContextLab / ContextLab/supereeg
Change save format to npz from h5py
- Dominant language
- Python
- Stars
- 38
- Forks
- 19
- PR merge metrics
- No merged PRs in 30d
Description
hdf5 may be overly complicated for our brain and model objects, and a higher potential for bugs. We should consider switching to npy/z files. Some more things to consider:
- Brain objects can be huge so saving with compression is probably a good thing
- We want to efficiently select and load subsets of the brain object so compression is probably not a good thing
Is there a solution that solves both of these problems? If not, what do we care about more?
Contributor guide
No contributing guide indexed for this repository
Research direction
The issue names no files, tests, or entry points. First compare the current h5py save/load path with npy/npz options, focusing on compression and subset loading; done requires a decided format and an agreed implementation scope.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- data
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 20/100