BlueBrain / BlueBrain/Ultraliser

Inquiries about Vessel Graph format for ultraVessMorpho2Mesh

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#65 17 comments 0 reactions 1 assignee Claimed by @marwan-abdellah View on GitHub
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Description

Hi,

Thanks for the amazing work. I am trying to build mesh out of vessel skeletons. I have been reading the wiki page to prepare the input from numpy arrays,

https://github.com/BlueBrain/Ultraliser/wiki/Examples-ultraVessMorpho2Mesh

I noticed that there is only a link to .SWC format. Could you please also explain how I can prepare VMV and H5 formats?

Also, for the SWC format, what should the Structure Identifier be if I am not working with neuro data?

Besides, I also notice that all the examples in the ultraVessMorpho2Mesh page are using the command ultraAstroMorpho2Mesh instead. Is this a typo or what is intended?

Thanks a lot in adavance!

Best regards,

Wesley

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