Proprietario
AllenNeuralDynamics
236 repository indicizzati · Vedi su GitHub
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aind-ephys-pipeline
AIND pipeline for processing extracellular electrophysiology data
Nextflow · 41 stelle
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aind-data-schema
A library that defines AIND data schema and validates JSON.
Python · 34 stelle
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openscope-community-predictive-processing
This repository serves as a hub for community-driven contributions, documentation, and project tracking of the OpenScope Predictive Proce...
Python · 26 stelle
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aind-ephys-spikesort-kilosort25-full
CodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.
Python · 14 stelle
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aind-large-scale-cellpose
Large-scale cell segmentation with cellpose.
Python · 10 stelle
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Rhapso
An open-source Python toolkit for large-scale fluorescence microscopy data alignment and fusion.
Python · 9 stelle
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dynamic-foraging-task
Bonsai/Harp workflow for Dynamic Foraging with Python GUI for visualization and control
Python · 7 stelle
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aind-smartspim-pipeline
Repository that hosts the SmartSPIM pipeline code
Nextflow · 6 stelle
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TigerASI
a lightweight python interface for ASI brand Tiger Controllers
Python · 5 stelle
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wavpack-numcodecs
Numcodecs implementation of the WavPack audio codec
C · 5 stelle
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anivia
Fork of VGG VIA to better support annotation of animal pose images
JavaScript · 4 stelle
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harp.device.treadmill-driver
0326: a Harp-compatible device for controlling an instrumented mouse treadmill
Jupyter Notebook · 4 stelle
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voxel-classic
General purpose microscope control repository
Python · 4 stelle
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view
Model/View for exa-spim
Python · 4 stelle
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harp.device.lickety-split
0360: an ephys-compliant capacitive lick detector
C++ · 4 stelle
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runze-control
Python Driver for Aurora Pro Scientific (aka Runze Fluid) syringe pumps
Python · 4 stelle
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parallax
Automatic detection of probe position from multiple camera views
Python · 4 stelle
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aind-SmartSPIM-segmentation
segmentation module for SmartSPIM cloud pipeline
Python · 4 stelle
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aind-smartspim-stitch
Stitching and fusion pipeline in the cloud
Python · 4 stelle
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aind-smartspim-ccf-registration
Registration of lightsheet whole brain images to the Allen CCF V3 Atlas
Python · 4 stelle
- 216 altri repository si trovano su Vedi su GitHub
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AllenNeuralDynamics/aind-exaSPIM-pipeline-utils#39 · 0 commenti · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/aind-exaSPIM-pipeline-utils#68 · 1 commento · 0 reazioni · 1 assegnatario ·
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AllenNeuralDynamics/aind-exaSPIM-pipeline-utils#69 · 0 commenti · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/aind-exaSPIM-pipeline-utils#74 · 0 commenti · 0 reazioni · 0 assegnatari ·
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documentation
AllenNeuralDynamics/aind-exaSPIM-pipeline-utils#75 · 0 commenti · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/biodata-registry-sandbox#3 · 0 commenti · 0 reazioni · 1 assegnatario ·
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AllenNeuralDynamics/biodata-registry-sandbox#6 · 0 commenti · 0 reazioni · 0 assegnatari ·
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Search API Aperta
AllenNeuralDynamics/biodata-registry-sandbox#7 · 0 commenti · 0 reazioni · 1 assegnatario ·
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Vector Index Aperta
AllenNeuralDynamics/biodata-registry-sandbox#8 · 1 commento · 0 reazioni · 1 assegnatario ·
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Deploy to Cloud Environment Aperta
AllenNeuralDynamics/biodata-registry-sandbox#9 · 1 commento · 0 reazioni · 1 assegnatario ·
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AllenNeuralDynamics/biodata-registry-sandbox#10 · 0 commenti · 0 reazioni · 0 assegnatari ·
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API client for R Aperta
AllenNeuralDynamics/biodata-registry-sandbox#13 · 0 commenti · 0 reazioni · 0 assegnatari ·
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UUIDs for PKs Aperta
AllenNeuralDynamics/biodata-registry-sandbox#14 · 1 commento · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/Aind.Behavior.DirectedForaging#22 · 0 commenti · 0 reazioni · 0 assegnatari ·
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Documentation Aperta
AllenNeuralDynamics/Aind.Behavior.DirectedForaging#28 · 0 commenti · 0 reazioni · 1 assegnatario ·
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AllenNeuralDynamics/nmcp-precomputed#2 · 0 commenti · 0 reazioni · 0 assegnatari ·
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release to pypi Aperta
AllenNeuralDynamics/nmcp-precomputed#3 · 2 commenti · 0 reazioni · 0 assegnatari ·
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qc
AllenNeuralDynamics/contraqctor#21 · 0 commenti · 0 reazioni · 0 assegnatari ·
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contract
AllenNeuralDynamics/contraqctor#48 · 0 commenti · 0 reazioni · 0 assegnatari ·
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contract
AllenNeuralDynamics/contraqctor#49 · 0 commenti · 0 reazioni · 0 assegnatari ·
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contract
AllenNeuralDynamics/contraqctor#57 · 0 commenti · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/contraqctor#85 · 2 commenti · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/contraqctor#86 · 0 commenti · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/contraqctor#87 · 0 commenti · 0 reazioni · 0 assegnatari ·
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Add API to merge qc reports Aperta
AllenNeuralDynamics/contraqctor#88 · 0 commenti · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/contraqctor#95 · 0 commenti · 0 reazioni · 0 assegnatari ·
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enhancement
AllenNeuralDynamics/foraging-behavior-browser#2 · 1 commento · 0 reazioni · 1 assegnatario ·
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export data Apertaenhancement
AllenNeuralDynamics/foraging-behavior-browser#3 · 0 commenti · 0 reazioni · 1 assegnatario ·
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multiprocessing to speed up Apertaenhancement
AllenNeuralDynamics/foraging-behavior-browser#4 · 0 commenti · 0 reazioni · 1 assegnatario ·
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enhancement
AllenNeuralDynamics/foraging-behavior-browser#5 · 0 commenti · 0 reazioni · 1 assegnatario ·
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enhancement
AllenNeuralDynamics/foraging-behavior-browser#9 · 0 commenti · 0 reazioni · 1 assegnatario ·
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enhancement
AllenNeuralDynamics/foraging-behavior-browser#15 · 0 commenti · 0 reazioni · 1 assegnatario ·
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enhancement
AllenNeuralDynamics/foraging-behavior-browser#34 · 2 commenti · 0 reazioni · 1 assegnatario ·
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add overlayed x-y plot Apertaenhancement
AllenNeuralDynamics/foraging-behavior-browser#35 · 0 commenti · 0 reazioni · 1 assegnatario ·
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bug
AllenNeuralDynamics/foraging-behavior-browser#60 · 1 commento · 0 reazioni · 1 assegnatario ·
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enhancement
AllenNeuralDynamics/foraging-behavior-browser#61 · 0 commenti · 0 reazioni · 1 assegnatario ·
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bug
AllenNeuralDynamics/foraging-behavior-browser#93 · 0 commenti · 0 reazioni · 1 assegnatario ·
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AllenNeuralDynamics/foraging-behavior-browser#96 · 0 commenti · 0 reazioni · 0 assegnatari ·
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bug
AllenNeuralDynamics/foraging-behavior-browser#115 · 0 commenti · 0 reazioni · 1 assegnatario ·
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AllenNeuralDynamics/aind-analysis-wrapper-template#19 · 0 commenti · 0 reazioni · 0 assegnatari ·
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remove email secret Aperta
AllenNeuralDynamics/aind-analysis-wrapper-template#25 · 2 commenti · 0 reazioni · 1 assegnatario ·
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fix env var prioritization Aperta
AllenNeuralDynamics/aind-analysis-wrapper-template#26 · 0 commenti · 0 reazioni · 1 assegnatario ·
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AllenNeuralDynamics/aind-analysis-wrapper-template#27 · 2 commenti · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/aind-analysis-pipeline-template#2 · 2 commenti · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/aind-analysis-pipeline-template#11 · 0 commenti · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/aind-analysis-pipeline-template#12 · 0 commenti · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/aind-analysis-pipeline-template#13 · 0 commenti · 0 reazioni · 0 assegnatari ·
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Update README instructions Aperta
AllenNeuralDynamics/kicad-lib#1 · 0 commenti · 0 reazioni · 0 assegnatari ·
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blocked
AllenNeuralDynamics/aind-codeocean-utils#10 · 2 commenti · 0 reazioni · 1 assegnatario ·
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AllenNeuralDynamics/aind-codeocean-utils#23 · 3 commenti · 0 reazioni · 0 assegnatari ·