AllenNeuralDynamics / AllenNeuralDynamics/biodata-schema
Specimen Class
- Dominant language
- Python
- Stars
- 0
- Forks
- 0
- PR merge metrics
- No merged PRs in 30d
Description
We need a specimen class to cover things like:
- cell culture
- biosamples (e.g. blood draws)
- single cell?
Nathalie in Cell Science sending me some info on their cell culture needs.
There is a Cell Line Ontology that might be useful.
Consult with both cell science, brain science and immunology to make sure this covers different uses.
Contributor guide
Research direction
No files or tests are named. Start by reviewing the existing schema conventions, then consult cell science, brain science, and immunology and examine whether the Cell Line Ontology fits. Done means agreeing on a specimen model that covers cell cultures, biosamples such as blood draws, and the possible single-cell use case.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- bioinformatics
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Quiet
- Clarity
- Mostly clear
- Newbie friendliness
- 32/100