AllenNeuralDynamics / AllenNeuralDynamics/aind-ophys-extraction

Don't use photostimulated frames for ROI detection when using CaImAn

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#31 0 comments 0 reactions 1 assignee Claimed by @j-friedrich View on GitHub
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Description

Get the ROIs on subset of the data without photostimulation, then extract traces on the full data, as we already do for Cellpose or Suite2p initialization

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