AllenNeuralDynamics / AllenNeuralDynamics/aind-metadata-mapper

Extract metadata from mesoscope rig acquisition files

Open
#24 0 comments 0 reactions 1 assignee Claimed by @arielleleon View on GitHub
Dominant language
Python
Stars
0
Forks
2
Avg merge
1d 7h
Merged PRs (30d)
1

Description

Write a script that generates session.json based on the files acquired on Mindscope rigs. Use `aind_data_schema.ophys.ophys_rig` to generate valid JSON.

https://github.com/AllenNeuralDynamics/aind-data-schema/blob/main/src/aind_data_schema/ophys/ophys_rig.py

This may require schema changes, which can be tracked in separate issues as needed.

Nov 8: Kayvon is looking into a related process for Bergamo.

Prior to capsule, script running on the rig. AIND data transfer service. Will need to be automated.
Should involve John and David.

Contributor guide

Open the contributing guide

Assessment

This issue has not been assessed yet.

Get new issues in your inbox

A short digest of beginner-friendly GitHub issues.