AllenCell / AllenCell/allencell-segmenter-ml

Require >= 4 images in dataset

Open
#457 0 comments 0 reactions 1 assignee Claimed by @saeliddp View on GitHub
Dominant language
Python
Stars
5
Forks
3
PR merge metrics
No merged PRs in 30d

Description

## Context
During testing with a dataset of 2 images, @derekthirstrup ran into a bug during training. Effectively, training would fail because cyto-dl did not like that our `test.csv` and `val.csv` files were empty. Then, because training would fail, no `metrics.csv` file would be created. Since we haven't addressed #438 , this would cause a different error: file not found (since we look for final loss when we display the training finished dialog).

## Solution
After discussing with @benjijamorris , we decided that we should require a dataset of >= 4 images since datasets smaller than this are unlikely to produce a reasonable model anyways.

Contributor guide

No contributing guide indexed for this repository

Assessment

This issue has not been assessed yet.

Get new issues in your inbox

A short digest of beginner-friendly GitHub issues.