AllenCell / AllenCell/allencell-segmenter-ml

Catch-all notes only

Đang mở
#284 0 bình luận 0 reaction 1 người được giao Được @thao-do nhận Xem trên GitHub
Ngôn ngữ chính
Python
Star
5
Fork
3
Chỉ số merge pull request
Không có pull request nào được merge trong 30 ngày

Mô tả

Notes for future features but come up during current discussion:
#### Curation:
- Ability to skip images
- Ability to accept all images
- Image pre-adjustment or auto-adjustment
- random image selection
- Overwrite masks: if user add more polygons to the Mask layer then resave the mask, currently a message pops up to ask if they want to overwrite the saved mask - we're assuming user know that all polygons (old & newly created) on the mask layer will be saved and not just the ones they just added. Update the wording to clarify this.
- allow recurating the image dataset (same data, different sorting or masking)
** note: new data = new model
- in existing model: if curation has not started, everything is as default of "Start a new model" route; if curation has started and not complete: resume progress; if curation has started and completed: show end screen with feedback message to state that and direct to Training tab (and option to restart curation from scratch - reload directory and all)
- "Use this segmentation" dropdown idea: checkbox for each mask to turn on (Nope: Option: Seg1, Seg2, Exclude or Merge - Merge will trigger open the optional Mask(s) area (both mask?? but excluding might be used regardless of merging)

#### Prediction
- View output images from directory option: progress bar if prediction is going to take a while, showing the number of files being completed; when prediction on an image directory is completed, a popup dialog notifies the user, with an action button to view their images (loaded in set of raw/pred/original seg), also we can address the thresholding adjustment for probability output format (current format is binary with default threshold of 0.5) - this could potentially be a 4th module for image navigation in a folder, image adjustment, and image annotation (veryyyy lofty dream)
- Include a model LaminB1_tutorial

####Training
- allow continue training a model (all settings the same, just increase training step or time)
-

Specific UI tasks: Some might need to be split into smaller tasks or just more info:
- [ ] Update hover cursor when hovering over interact-able elements
- [ ] Consistent text styling for header etc. (add instances that need to be fixed here)
- [ ] Update button colors in Mask section >> higher priority than the rest
- [ ] Update button's states' styling (consistent style and color changed based on state)

Hướng dẫn đóng góp

Chưa lập chỉ mục được hướng dẫn đóng góp cho kho mã nguồn này

Đánh giá

Issue này chưa được đánh giá.

Nhận issue mới trong hộp thư của bạn

Bản tóm tắt ngắn những issue GitHub phù hợp với người mới.