AlgebraicJulia / AlgebraicJulia/Structured-Epidemic-Modeling
Problem wiring a simple SEIR model
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Description
For some reason, the following code for an SEIR model wires E to R, rather than I to R. Can anyone spot where I'm going wrong?
```julia
using AlgebraicPetri,AlgebraicPetri.TypedPetri
using Catlab, Catlab.CategoricalAlgebra, Catlab.Programs
using Catlab.WiringDiagrams, Catlab.Graphics
using AlgebraicDynamics.UWDDynam
epi_transitions = LabelledPetriNet(
[:Pop],
:infection=>((:Pop, :Pop)=>(:Pop, :Pop)),
:progression=>(:Pop=>:Pop),
:recovery=>(:Pop=>:Pop)
)
seir_uwd = @relation () where (S::Pop, E::Pop, I::Pop, R::Pop) begin
infection(S, I, E, I)
progression(E, I)
recovery(I, R)
end
seir_acst = oapply_typed(epi_transitions, seir_uwd, [:β, :δ, :γ])
seir_lpn = dom(seir_acst)
Graph(seir_lpn)
```
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