AaronRipleyQiagen

AaronRipleyQiagen/NMDX-Data-Analysis

Stars: 2
Forks: 1
Open beginner issues: 0
Indexed issues: 17

Dominant language: Jupyter Notebook
License: No license data
Last GitHub push: Jun 7, 2022
Latest indexed: Sep 13, 2026
Contributing guide: No contributing guide
Code of conduct: No code of conduct
Beginner labels: good first issue
PR merge metrics: No merged PRs in 30d

Open All

17 open issues indexed

Obtain Complete Dataset to be used for Analysis Open

AaronRipleyQiagen/NMDX-Data-Analysis#1 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 13, 2026
Write Script to plot amplification curves for the "groups" identified in analysis. Open

enhancement

AaronRipleyQiagen/NMDX-Data-Analysis#6 · 1 comment · 0 reactions · 1 assignee · Indexed Sep 13, 2026
Write Script to Create Sample Key for 4Plex ROC Analysis Open

enhancement

AaronRipleyQiagen/NMDX-Data-Analysis#10 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 13, 2026
Upload 4Plex V2 Compiled Data to neumodxRawDataDB Open

datarequest

AaronRipleyQiagen/NMDX-Data-Analysis#11 · 0 comments · 0 reactions · 2 assignees · Indexed Sep 13, 2026
Adapt ROC Analysis Script used for EBV to work for 4Plex V2 Open

enhancement

AaronRipleyQiagen/NMDX-Data-Analysis#12 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 13, 2026
Write First Draft of Protocol for 4Plex V2 Cutoff Verification Open

documentation

AaronRipleyQiagen/NMDX-Data-Analysis#13 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 13, 2026
Write Draft of Report for 4Plex V2 Cutoff Verification Open

documentation

AaronRipleyQiagen/NMDX-Data-Analysis#14 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 13, 2026
Write Draft of Technical Report for findings of Investigation Open

documentation

AaronRipleyQiagen/NMDX-Data-Analysis#15 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 13, 2026
Organize Main Branch Open

AaronRipleyQiagen/NMDX-Data-Analysis#20 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 13, 2026
Write Function to determine if Neighboring lanes of PCR Cartridges had a specific Localized Result. Open

enhancement

AaronRipleyQiagen/NMDX-Data-Analysis#25 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 13, 2026
Write Function to determine if time in extraction plate or cartridge between LHPA, LHPB and LHPC impact localized result's Ct, MPH, EP, and EPR. Open

enhancement

AaronRipleyQiagen/NMDX-Data-Analysis#28 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 13, 2026
Common code dictionary Open

documentation

AaronRipleyQiagen/NMDX-Data-Analysis#30 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 13, 2026
Write a function that takes a Gen2 data file to create summary tables Open

enhancement

AaronRipleyQiagen/NMDX-Data-Analysis#31 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 13, 2026
Write a scrip to generate consumable list and line data from Gen2 data file Open

enhancement

AaronRipleyQiagen/NMDX-Data-Analysis#33 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 13, 2026
Ct Ep MPH summary from gen2 CSV file Open

enhancement

AaronRipleyQiagen/NMDX-Data-Analysis#34 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 13, 2026
Include overall result calls and flags information in the Gen2 datafile Open

datarequest

AaronRipleyQiagen/NMDX-Data-Analysis#35 · 2 comments · 0 reactions · 1 assignee · Indexed Sep 13, 2026
Generation barcode list for new V&V study Open

good first issue

AaronRipleyQiagen/NMDX-Data-Analysis#37 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 13, 2026

A short digest of beginner-friendly GitHub issues.