theochem / theochem/grid

Get Atomic Property

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Dominant language
Python
Stars
101
Forks
40
PR merge metrics
No merged PRs in 30d

Description

Create a method inside MolGrid called get_atomic_property that takes in a atomic property as an array evaluated on the MolGrid.points and returns another atomic property of that array.

This method uses the aim_weights and MolGrid.indices in-order to get the atomic property.

Contributor guide

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First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start from the MolGrid implementation and inspect how aim_weights, MolGrid.points, and MolGrid.indices are currently used. Define the method's expected atomic-property shape and verify that get_atomic_property maps values evaluated on the points back to the corresponding atoms in index order.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
data
Issue type
Feature
Difficulty
3/5
Estimated time
1-2 days
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
35/100

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