theislab / theislab/CellFlow

Update iNeuron tutorial

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bug
Dominant language
Python
Stars
159
Forks
27
PR merge metrics
No merged PRs in 30d

Description

Report

It's an older version of cellflow, e.g. with flow instead of probability_path

Version information

No response

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Find the iNeuron tutorial referenced by the issue and compare its CellFlow examples with the current API. Update the outdated flow usage to the current probability_path terminology, then verify that the tutorial runs with the present version of CellFlow.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
documentation
Issue type
Documentation
Difficulty
2/5
Estimated time
1-3 hours
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
45/100

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