Output of `predict`
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@joschif is already working on this.
Since Nov 1, 2024.
bug
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- Python
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Description
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When split_covariates contains values not in perturbation_covariates or sample_covariates, e.g. zebrafish germ layers, the predict function only returns predictions for "one germ layer source".
Now the questions is what we expect it to return. I see two options:
- a dictionary where the
conditionincludes thesplit_covariatescategories, e.g.pert1_pert2_18_mesoderm - we take the union of the germ layers and concatenate the result internally to only contain perturbation/sample covariates, e.g.
pert1_pert2_18
In any case, I have to adapt the backend to make either of those work.
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