tensorflow / tensorflow/datasets

[data request] <Brain Tumor Data>

Open
#1,752 3 comments 0 reactions 0 assignees View on GitHub

Nobody has claimed this yet.

dataset request
Dominant language
Python
Stars
4.6k
Forks
1.6k
Avg merge
3h 54m
Merged PRs (30d)
1

Description

  • Name of dataset: Brain Tumor Segmentation Data
  • URL of dataset: [https://ieee-dataport.org/competitions/brats-miccai-brain-tumor-dataset]
  • Citation: [1] B. H. Menze, A. Jakab, S. Bauer, J. Kalpathy-Cramer, K. Farahani, J. Kirby, et al. "The Multimodal Brain Tumor Image Segmentation Benchmark (BRATS)", IEEE Transactions on Medical Imaging 34(10), 1993-2024 (2015) DOI: 10.1109/TMI.2014.2377694

[2] S. Bakas, H. Akbari, A. Sotiras, M. Bilello, M. Rozycki, J.S. Kirby, et al., "Advancing The Cancer Genome Atlas glioma MRI collections with expert segmentation labels and radiomic features", Nature Scientific Data, 4:170117 (2017) DOI: 10.1038/sdata.2017.117

[3] S. Bakas, M. Reyes, A. Jakab, S. Bauer, M. Rempfler, A. Crimi, et al., "Identifying the Best Machine Learning Algorithms for Brain Tumor Segmentation, Progression Assessment, and Overall Survival Prediction in the BRATS Challenge", arXiv preprint arXiv:1811.02629 (2018)

  • Short description of dataset and use case(s): <BraTS 2018 utilizes multi-institutional pre-operative MRI scans and focuses on the segmentation of intrinsically heterogeneous (in appearance, shape, and histology) brain tumors, namely gliomas. Furthemore, to pinpoint the clinical relevance of this segmentation task, BraTS’18 also focuses on the prediction of patient overall survival, via integrative analyses of radiomic features and machine learning algorithms.>
    *License of Dataset - MIT License

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Review the dataset URL, cited papers, and license information in the issue first. No repository files, tests, or entry points are named, so determine the project’s dataset-contribution entry point and define completion as integrating the Brain Tumor Segmentation Data with its metadata and use-case details.

Written by the indexing model from the issue text.

Assessment

Domain
data, machine-learning
Issue type
Feature
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
25/100

Get new issues in your inbox

A short digest of beginner-friendly GitHub issues.