sokrypton / sokrypton/ColabFold
Trying to run ColabFold v1.5.2
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- Dominant language
- Jupyter Notebook
- Stars
- 2.9k
- Forks
- 747
- PR merge metrics
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Description
I'm trying to run ColabFold v1.5.2 but I'm not able.
I'm using this website: https://colab.research.google.com/github/sokrypton/ColabFold/blob/v1.5.2/AlphaFold2.ipynb#scrollTo=iccGdbe_Pmt9
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by opening the v1.5.2 AlphaFold2.ipynb notebook at the linked Colab URL and running it to identify the failing step. Record the cell, error output, and environment details; the issue is ready for a fix only once the failure is reproducible and the notebook runs successfully.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- jupyter-notebook
- Domain
- bioinformatics
- Issue type
- Bug
- Difficulty
- 3/5
- Estimated time
- 1-2 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 20/100