sokrypton / sokrypton/ColabFold
LinAlgError: SVD did not converge
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- Dominant language
- Jupyter Notebook
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Description
Predicting a trimer using multimer v3
LinAlgError: SVD did not converge
Context
Possible I am doing something wrong, but I am not sure what. I've generally not had issues with this tool
Your Environment
Running on Colabfold Pro, A100 selected
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by reproducing the reported trimer prediction with multimer v3 in ColabFold Pro on an A100, using the traceback in the attached image as the initial clue. The issue does not name a source file or test; done means identifying the input or workflow that triggers the SVD failure and confirming that the prediction completes or the failure is clearly diagnosed.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- jupyter-notebook
- Domain
- bioinformatics
- Issue type
- Bug
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100