sokrypton / sokrypton/ColabFold
RoseTTAFold2NA?
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- Dominant language
- Jupyter Notebook
- Stars
- 2.9k
- Forks
- 747
- PR merge metrics
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Description
are there any colab notebooks around for running RoseTTAFold2NA?
ColabFold has been game-changer for me, I'd love to be able to try out RF2NA too..
Otherwise, does anybody have proteins that have AF2/RF thinks fold into DNA/RNA like geometries (naturally occurring NA mimics dont seem to do great).
I know this is a long-shot, just thought I'd ask.
Thanks!
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
The issue mentions Colab notebooks and RoseTTAFold2NA but names no repository file, test, or entry point. Start by determining whether a supported notebook exists or can be added, then define completion as providing a working RF2NA Colab workflow or a clear answer that one is unavailable.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- jupyter-notebook
- Domain
- bioinformatics, machine-learning
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 15/100