sokrypton / sokrypton/ColabFold
Add v1.5.3 tag for latest ColabFold
Nobody has claimed this yet.
- Dominant language
- Jupyter Notebook
- Stars
- 2.9k
- Forks
- 747
- PR merge metrics
- No merged PRs in 30d
Description
The current ColabFold with OpenMM updated from 7.5.1 to 7.7.0 does not have a git version tag. The most recent ColabFold version tag v1.5.2 from March 4, 2023 has the broken energy minimization. It would be nice to tag the current ColabFold with v1.5.3 so users could cite exactly which version of ColabFold they used in their research.
I maintain ColabFold in ChimeraX and want to be able to tell the users the exact version of ColabFold that is being used. Currently ChimeraX just uses a ColabFold version defined by a long github hash.
Thanks!
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Review the existing v1.5.2 tag and identify the current ColabFold commit using OpenMM 7.7.0. Create the v1.5.3 git tag on that commit so users, including ChimeraX users, can cite the exact version.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- jupyter-notebook
- Domain
- bioinformatics, release
- Issue type
- Feature
- Difficulty
- 1/5
- Estimated time
- Under an hour
- Activity status
- Stale
- Clarity
- Clearly specified
- Newbie friendliness
- 35/100