sokrypton / sokrypton/ColabFold
FAILED_PRECONDITION: Couldn't get ptxas version string: INTERNAL: Couldn't invok
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- Dominant language
- Jupyter Notebook
- Stars
- 2.9k
- Forks
- 747
- PR merge metrics
- No merged PRs in 30d
Description
Expected Behavior
Current Behavior
Steps to Reproduce (for bugs)
I install and run this model in 3090 24GB, Driver 525m CUDA :12.0
I just could predict part of PDBs, and the memory of GPU is little used.
ColabFold Output (for bugs)
The issue just like :
actually, the memory-usage just is 264/24576 Mb
Context
Your Environment
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
No source file, test, or entry point is named in the report. Start by reproducing the ColabFold model run on the stated RTX 3090 and CUDA 12.0 environment, then inspect the complete ptxas error and GPU-memory behavior. Done means identifying the cause and documenting or validating a fix that allows prediction to complete.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- jupyter-notebook
- Domain
- bioinformatics, machine-learning
- Issue type
- Bug
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 20/100