sokrypton / sokrypton/ColabFold

Keep pending FOREVER

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#370 2 comments 0 reactions 0 assignees View on GitHub

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Dominant language
Jupyter Notebook
Stars
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Forks
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Description

When can ColabFold be fixed with continous Pending process as it used to?

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by reproducing the continuously Pending process described in the issue and review the current ColabFold execution path that handles job status. Trace where the process remains pending and compare it with the earlier behavior referenced by the report. Done means the cause is identified and the intended pending behavior is verified with a reproducible check.

Written by the indexing model from the issue text.

Assessment

Tech stack
jupyter-notebook
Domain
bioinformatics, machine-learning
Issue type
Bug
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
25/100

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