scverse / scverse/squidpy

Nhood composition comparison across conditions?

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@giovp is already working on this.

Since Mar 17, 2022.

sdata compat :milky_way:
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Description

Hello!

I work with CODEX data across different conditions and I was wondering whether there is a way to visualise/summarise the differences in neighbourhood composition across the different conditions, after running squidpy.gr.nhood_enrichment() ?

Thanks!

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